Best Cruises in San Diego

Published: July 18, 2024
Woman looking across the water towards San Diego's skyline

San Diego Bay is second to none when it comes to world-class beaches, shops, restaurants and entertainment, not to mention those swoonsome sunsets so typical of the SoCal coastline. You might find yourself hiking the pine-scented bluffs of La Jolla, diving kelp forests at Point Loma, fishing for herring from the historic Ocean Beach Pier, sipping craft beer on the Mission Bay boardwalk, or toasting s’mores at sundown on lively Pacific Beach. But there’s just as much fun to be had on the water, with sport and snorkeling activities aplenty as well as plenty of opportunities to go exploring and whale-watching by boat. Read on for our guide to making the best of the Bay (and beyond) with our pick of the best cruises in San Diego…

The Harbor Cruise

San Diego's Seaport Village

The classic harbor cruise is a must-do for newbies, as essential a San Diego activity as experiencing the Gaslamp Quarter nightlife, saying hey to the La Jolla seals, or ogling Monet masterpieces in the San Diego Museum of Art. Here’s your chance to kick back, relax and let the crew do the sightseeing for you. Landmarks you’ll spot along the way include Seaport Village (pictured), Coronado Island, the Cabrillo National Monument, and the Old Point Loma Lighthouse on the tip of the peninsula. Crew will also be on hand to serve drinks and point out any native marine life along the way. The San Diego Harbor cruise can be booked via a variety of different operators – the 90-minute City Cruises experience is one of the best and is available as part of the money-saving San Diego attraction pass from Go City. Get more info on pass options here.

The Whale-Watching Cruise

A gray whale's tail

If viewing whales and dolphins in their natural habitat is on your bucket list, you’ve come to the right place. San Diego’s balmy waters are prime territory for marine mammals: gray whales cruise through the bay en route to and from Mexico’s calving lagoons in winter and spring, while blues cruise the same aquatic highway in summer. Pods of dolphins and colonies of harbor seals mean you rarely have to wait long before some sort of sighting. 

Boat tours depart daily from Downtown and Mission Bay, with many guaranteeing a refund in the unlikely event you do fail to set eyes on any of our splendid sea-faring friends.

The Speed Boat Cruise

Speed boats in San Diego

Take it up a notch (or seven) on a speed boat adventure across San Diego Bay. Ok, so this one is less a cruise and more of a white-knuckle ride (depending on who’s doing the driving, of course). Just pick up your 13-foot, two-person cruiser and, well, the Bay is your oyster. Maybe you’ll cruise over for close-up views of the USS Midway aircraft museum, or meander down to admire the curvaceous Coronado Bridge, a 200-meter engineering masterpiece in concrete and steel that links Coronado Island to the mainland. Or, y’know, you can just spend the whole time doing donuts in the harbor. The choice is yours. Speed boat hire is also available as part of the Go City San Diego pass.

The Coronado Ferry Cruise

Woman in a summer dress in front of Coronado Island's iconic Hotel del Coronado

The cute old-fashioned ferry that chugs across the bay from San Diego to Coronado Island is hands-down the most romantic way to travel between the two. Hop aboard at Broadway Pier (every hour) or San Diego Convention Center (every half-hour) to reach the island in just a few short minutes. There’s plenty to do once on the island, too, from selfies at the iconic Hotel del Coronado (pictured) to farmers’ markets, coastal cycling adventures, and firepit s’mores on the beach. Check out our guide to all things Coronado here.

The Amphibious Cruise

Street sign over the Gaslamp Quarter in San Diego

San Diego SEAL Tours offers the best of both sightseeing worlds thanks to its amphibious ‘boats with wheels’. Board at Seaport Village or the Embarcadero for a 100-minute narrated tour that takes you on one of San Diego’s best ‘cruises’ first through the scenic streets of downtown San Diego then into the water. Transformation from bus to boat complete, the tour continues to sights including the millionaire mansions at Point Loma, Shelter Island, and the world-famous Scripps Institution of Oceanography.

The Foodie Cruise

Bottle of bubbly and two glasses on a boat

Everybody knows serious sightseeing can be hungry work. What better way to acknowledge this than by booking one of San Diego’s top brunch or dinner cruises? Again, there are loads of different operators to pick from, but City Cruises are among the most reputable locally. Get your sea legs on for a two-hour brunch/sightseeing experience that includes pastries, eggs, smoked salmon and more, plus unlimited mimosas during the two-hour cruise. Or, if you prefer to wait until the sun’s over the yardarm, opt for a dinner cruise that promises cocktails, a la carte dining, live DJs and swoonsome views of the San Diego skyline at sunset.

The Gondola Cruise

The Coronado Bridge at sunset

Like your cruise experiences a little more… quirky? San Diego Gondola Cruises has just the thing for you! As the name suggests, this experience brings a little slice of Venice to Southern California, with your choice of daytime or sunset cruises of the Coronado Cays aboard a Venetian-style gondola. The ride comes complete with stripy-shirted gondolier, traditional Italian music, and (for an extra charge) a real-life mandolin player. You can even add wine and truffles to the 50-minute experience. Who said romance is dead?

The Fishing Cruise

Deep-sea fishing reel

The waters around San Diego are rich in sea bass, rock fish, halibut, yellowtail and more. Why else did you think so many dolphins, seals and gulls hang out along the coastline here? There’s a wide range of fishing charters available, from half-day local forays into the harbor and kelp fields to epic voyages into Mexican waters for prized game including dorado and bluefin tuna. Check out the plethora of local operators to find the trip that best suits your skill level and preferred catches.

Save on Tours, Attractions and Activities in San Diego

Save on admission to San Diego attractions with Go City. Check out @GoCity on Instagram for the latest top tips and attraction info.

Stuart Bak
Stuart Bak
Freelance travel writer

Stu caught the travel bug at an early age, thanks to childhood road trips to the south of France squeezed into the back of a Ford Cortina with two brothers and a Sony Walkman. Now a freelance writer living on the Norfolk coast, Stu has produced content for travel giants including Frommer’s, British Airways, Expedia, Mr & Mrs Smith, and now Go City. His most memorable travel experiences include drinking kava with the locals in Fiji and pranging a taxi driver’s car in the Honduran capital.

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San Diego Neighborhoods Guide - Where to Go & What to Visit for Tourists

Planning a vacation to San Diego? Our local experts put together a helpful San Diego neighborhoods guide so you can make the most of your time in San Diego. We highlighted a handful of the top attractions, places to see, and which neighborhoods in San Diego to visit during your vacation. Balboa Park North County Coastal San Diego’s North County Coastal region is home to many top attractions, beautiful beaches, natural preserves, and seaside villages. Things to Do in North County Coastal San Diego Go on a family adventure at the popular LEGOLAND® California and SEA LIFE® Aquarium. Check out the beautifully landscaped gardens and exhibits at the San Diego Botanic Garden. Explore animal wildlife of the Savannah on a mini-safari excursion at the San Diego Zoo Safari Park. La Jolla Mission Bay & the Beaches Mission Valley & Old Town Mission Valley is a popular place for visitors to stay. Its main street, Hotel Circle, is lined with moderately priced hotels that attract families and budget travelers. The Old Town Historic Park is where California began. Old Town is home to several museums that document the city’s unique history and lots of shops and casual restaurants. Be sure to visit the most haunted house in America for a spooky take on San Diego’s history. You can also opt to take a trolley ride of San Diego's Old Town, which will offer an excellent overview of the neighborhood and the city's impressive history. Hillcrest Hillcrest is San Diego’s first self-contained suburb and is known for being the central hub of San Diego’s gay and lesbian community. Visitors will notice the towering pride flag where the famous annual LGBT Pride Parade begins. The area features walkable streets complete with eclectic shops, cafes, restaurants, bars, and nightclubs. Downtown Little Italy As its name suggests, Little Italy is an area in Downtown San Diego rich with Italian culture from its early roots as a fishing neighborhood. Its Italian culture is apparent in its cuisine, little shops, and architecture. Things to Do in Little Italy Check out over 150 booths featuring fresh produce, artisan foods, and specialty items at the popular Farmer’s Market every Saturday between 8 am and 2 pm at W. Cedar and India streets. Leave your guidebook behind and hop into a GoCar for a GPS guided tour of the city. As you drive, the GoCar narrates the tour based on your surroundings. Learn all about the maritime history of the western world at the Maritime Museum of San Diego. Cortez Hill Cortez Hill is one of the oldest San Diego neighborhoods in Downtown. Visitors will enjoy the quaint, Victorian and row style townhomes and poking around the various shops. Things to Do in Cortez Hill Visit El Cortez hotel, a San Diego landmark built in 1926 in Spanish Colonial Revival Style. You’ll get a view of downtown San Diego and Balboa Park from the top of the hill. Get a little shopping in at the pedestrian-friendly area complete with shops and sidewalk cafes lining Fifth and Sixth Avenues. Core-Columbia Gaslamp Quarter/ Horton Plaza Named for its gas lamp lined streets, the Gaslamp Quarter is a top destination for shopping, fine dining, nightlife, and entertainment. Things to Do in the Gaslamp Quarter Visit the oldest surviving structure located in Downtown San Diego -- The Gaslamp Museum at the David-Horton House (formerly known as the William Heath Davis House), which was actually built in 1850. Head to the Horton Plaza, a multi-level shopping plaza, movie theatre, and recreational facility. Check out the popular nightclub scene for an evening packed with fun. East Village Located on the eastern side of Downtown San Diego, Eastern Village is home to the San Diego Padres and PETCO Park. Catch a game at the park or check out the fantastic view from home plate on a tour of the stadium. Marina The Marina district is home to the Embarcadero, Seaport Village, the bayside San Diego Convention Center, and more. Things to Do in the Marina District The New Children’s Museum features hands-on creative activities and innovative artwork that kids can touch, move, or climb. Head to Seaport Village, a 14-acre waterfront shopping, dining, and entertainment destination. Embarcadero The Embarcadero boardwalk runs along San Diego’s downtown waterfront extending from the Embarcadero Marina to the Maritime Museum of San Diego. Coronado Save on Attraction Admission in San Diego Neighborhoods If you're exploring this many different parts of San Diego, you're bound to want to visit a few of these exciting attractions. Consider picking up a San Diego attractions pass to suit your traveling needs. Whether you're in town for only a day or two, or even a whole week, you'll find the perfect pass for you. Save up to 55% versus paying at the gate!
Casey Makovich
A beach at sunset in La Jolla, San Diego
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Where To Stay in San Diego

Sunny San Diego is made up of a series of neighborhood villages, each with its own distinct personality and stacks of different things to see and do. But where to stay in this often bewildering landscape of canyons, mesas and golden California sands? Surfers and divers could do worse than La Jolla, with its easy access to rolling waves and underwater kelp forests. Bringing the kids? You’ll love the laid back family vibe of Ocean Beach and Coronado. If you’re just looking for some of that legendary San Diego nightlife, that’d be the Gaslamp Quarter and hip nearby neighborhoods of Hillcrest and North Park. Still not sure? Read on for our mini guide to where to stay in San Diego. Best for First Timers San Diego’s atmospheric Old Town is an intoxicating hybrid of Mexican, Spanish and American culture. Here, in the birthplace of California, first timers can truly immerse themselves in the city’s heritage. It’s a place where palm-lined streets are crammed with colorful shops and restaurants inside restored adobe buildings and there are more fab museums, galleries and – gulp – haunted houses than you can shake a very large stick at. Visit the notorious Whaley House Museum, once described by LIFE magazine as ‘the most haunted house in America’ and scare yourself silly on one of their spooky evening tours – if you dare. The nearby Old Town San Diego State National Park contains many more original and reconstructed 19th-century buildings including the old courthouse and restored Cosmopolitan Hotel. It’s a real slice of the Old West, with regular living history demonstrations and a colorful Mexican market housing independent boutiques, artisan souvenirs and, of course, plenty of lip-smackingly authentic taquerias. All of which makes the Old Town a fantastic choice for first-time visitors to San Diego. Couple that with easy access to Downtown, Mission Bay and historic Mission Valley, home to the Insta-perfect Mission San Diego de Alcalá (the sugar-white 18th-century church that gives the region its name), and you have all the ingredients for the perfect introduction to America’s Finest City. Best for Seeing it All Perched on the San Diego Bay, the Downtown neighborhood is the location for you if it’s fine restaurants, the best nightlife and easy access to the city’s bucket-list attractions that float your boat. Head to the waterfront Embarcadero for sport fishing, seal-spotting, sensational seafood and sweeping sunset views of Coronado, and get your fix of pizza and pasta in Little Italy, with its cobbled piazza, ornate tiled fountain and traditional trattorias. Sample some of San Diego’s famously excellent craft beers in the Gaslamp Quarter’s atmospheric dive bars or shake it up with rooftop cocktails and live music here in the city’s nightlife mecca. If you’re planning on seeing the Padres in action or spending a lot of time in Balboa Park (and let’s face it, why wouldn’t you?) Downtown is the place to stay. The Padres’ huge home stadium also puts on major concerts and has hosted such household names as Taylor Swift and Paul McCartney in recent years. Balboa Park is San Diego’s vast green lung. Walkable from Downtown, it also happens to contain some of the city’s biggest attractions, including – deep breath – San Diego Zoo, the Fleet Museum of Science, a Japanese Friendship Garden, the San Diego Museum of Art and an old-fashioned carousel. And that barely scratches the surface. Sun worshippers take note: while San Diego Bay is renowned for its views across the water it is less esteemed for its beaches. Because, well, there aren’t any. Fear not though: Ocean Beach, La Jolla and Pacific Beach are within your grasp thanks to Downtown’s proliferation of cabs and other easy transport links. Best for Families and Beach Lovers Sunny days that number well above the national average, a laid back SoCal vibe and some of the best beaches on the West Coast make San Diego a great choice for family vacations. South of the San Diego River, hippy-dippy Ocean Beach has a lovely community vibe. It’s packed with cute taquerias and boho boutiques and there’s a weekly market with live music and great street food. Not to mention that all-important stretch of sun-kissed California sand, where surfers ride the gently rolling waves, pelicans dive-bomb the herring-rich waters for their dinner and kids hunt for crabs and anemones in exposed tide pools beneath the epic, 600-meter Ocean Beach Pier. There’s even a dedicated dog beach here where your four-legged friends can frolic happily in the surf and sand with their doggo pals. Head over the river to Mission Bay for SeaWorld San Diego, where there are enough thrill rides and sea creatures to keep even the most jaded teen entertained for a day or more. Across the bay, Coronado’s landmark hotel is a tourist attraction in itself. The Hotel del Coronado is a San Diego institution (haunted, of course) that has been hosting US presidents, household-name celebs (you’ve heard of Marilyn Monroe and Sly Stallone, right?) and royalty since the 19th Century. Its turrets are even said to have inspired resident writer L. Frank Baum’s Emerald City in The Wonderful Wizard of Oz. Families build sandcastles along the fine stretch of golden sand in front of ‘The Del’, go paddle-boarding in the lagoon and gorge on firepit s’mores at sunset. Around 12 miles north of Downtown San Diego, La Jolla is an absolute playground for outdoor types. Set in pine-scented hills along seven miles of coastline, it scratches your surfing, sunbathing, sea-swimming and seal-spotting itches all in one go. Here’s where you can find native harbor seals basking in their dozens at Children’s Pool; spot dolphins and migrating whales from high in the bluffs of wildflower-rich Torrey Pines Nature Reserve; and scuba-dive among the green tendrils of La Jolla Cove’s vast kelp forests. Or get your sea-critter fix at the Scripps Aquarium where you can meet leopard sharks, loggerhead sea turtles and a giant Pacific octopus without even getting wet! La Jolla also boasts fine dining and boutique shopping galore in its village, a world-class clifftop golf course and some of the best outdoor art in the city. It’s also well-placed for day trips to family favorites just north of the city, including LEGOLAND California and the sprawling 1,800-acre San Diego Zoo Safari Park. Best for Hip Young Things Hip with a dollop of history might be the best way of describing Hillcrest and North Park, the alluring uptown neighborhoods that hug the north end of Balboa Park. Hillcrest is the heart of San Diego’s thriving LGBTQ+ community, its streets brimming with lively gay bars and cool brunch spots. Perhaps unsurprisingly, Hillcrest also provides the hub for the annual Pride festival. Each July, thousands of revelers from around the globe descend on its leafy avenues, here for the legendary Parade, huge music festival in Balboa Park and – in some cases at least – the 5k fun run. Like its neighbor North Park, Hillcrest is famed for its fine 1920s Crafstmen’s houses – simple dwellings that date to the 1920s Arts and Crafts movement – as well as being one of the jewels in San Diego’s craft ale crown thanks to the likes of the Hillcrest Brewing Company, self-styled ‘first gay brewery in the world’. North Park’s charming jumble of colorful street art, microbreweries and 1920s style earned it a place in Forbes’ 2012 list of America’s finest hipster ‘hoods, in which it was praised for its creativity and cultural diversity. And you don’t have to wander far in this art lovin’ beer drinkers’ paradise to see what they mean. There’s around a dozen local microbreweries within two or three blocks around University Avenue and 30th. Look out for the Belching Beaver Brewery, right next to the famously Instagrammable Greetings from San Diego mural, and the Fall Brewing Company, with their excellent hazy IPAs and beloved Humpty Dumpty mascot. Save on things to do in San Diego Save on admission to San Diego attractions with Go City. Check out @GoCity on Instagram and Facebook for the latest top tips and attraction info.
Stuart Bak
Stuart Bak

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